TAP tify in Spirogyra sp.

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Zygnemophyceae; Zygnematophycidae; Zygnematales; Zygnemataceae; Spirogyra; unclassified Spirogyra

Protein source: Delaux et al. (2015) Proc Natl Acad Sci U S A 112:13390-5


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

tify

(Domain names are clickable)



List of proteins (45)

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namename additionClick button to show/hide sequence: Download sequence?
c0_seq1_14_rccomp8084_c0_seq1_14 [3113 - 213] (REVERSE SENSE) len=4095 path=[3764:0-353 8313:354-354 4118:355-2938 7700:2939-3225 6702:3226-3505 9129:3506-3506 7614:3507-3526 6982:3527-4094]
c0_seq2_14_rccomp8084_c0_seq2_14 [3113 - 213] (REVERSE SENSE) len=4074 path=[3764:0-353 8313:354-354 4118:355-2938 7700:2939-3225 6702:3226-3505 6982:3506-4073]
c0_seq3_12_rccomp8084_c0_seq3_12 [3764 - 213] (REVERSE SENSE) len=3808 path=[3764:0-353 8313:354-354 4118:355-2938 6702:2939-3218 9129:3219-3219 7614:3220-3239 6982:3240-3807]
c0_seq4_12_rccomp8084_c0_seq4_12 [3743 - 213] (REVERSE SENSE) len=3787 path=[3764:0-353 8313:354-354 4118:355-2938 6702:2939-3218 6982:3219-3786]
c0_seq5_12_rccomp8084_c0_seq5_12 [3113 - 213] (REVERSE SENSE) len=3709 path=[3764:0-353 8313:354-354 4118:355-2938 7700:2939-3225 6702:3226-3505 9129:3506-3506 8401:3507-3708]
c0_seq6_10_rccomp8084_c0_seq6_10 [3422 - 213] (REVERSE SENSE) len=3422 path=[3764:0-353 8313:354-354 4118:355-2938 6702:2939-3218 9129:3219-3219 8401:3220-3421]
c0_seq10_15_rccomp8710_c0_seq10_15 [1541 - 345] (REVERSE SENSE) len=2551 path=[1909:0-324 5680:325-367 2234:368-492 2359:493-852 2719:853-1498 4002:1499-2075 3365:2076-2550]
c0_seq11_14_rccomp8710_c0_seq11_14 [1525 - 182] (REVERSE SENSE) len=2535 path=[1909:0-324 2234:325-449 2359:450-809 5626:810-836 2719:837-1482 4002:1483-2059 3365:2060-2534]
c0_seq12_11_rccomp8710_c0_seq12_11 [1868 - 780] (REVERSE SENSE) len=2524 path=[1909:0-324 5680:325-367 2234:368-492 6166:493-783 2359:784-1143 2719:1144-1789 3845:1790-1946 4002:1947-2523]
c0_seq13_15_rccomp8710_c0_seq13_15 [1498 - 182] (REVERSE SENSE) len=2508 path=[1909:0-324 2234:325-449 2359:450-809 2719:810-1455 4002:1456-2032 3365:2033-2507]
c0_seq14_10_rccomp8710_c0_seq14_10 [1852 - 737] (REVERSE SENSE) len=2508 path=[1909:0-324 2234:325-449 6166:450-740 2359:741-1100 5626:1101-1127 2719:1128-1773 3845:1774-1930 4002:1931-2507]
c0_seq15_8_rccomp8710_c0_seq15_8 [1967 - 1149] (REVERSE SENSE) len=2502 path=[1909:0-324 5680:325-367 2234:368-492 6166:493-783 2359:784-1143 5518:1144-1251 5626:1252-1278 2719:1279-1924 4002:1925-2501]
c0_seq16_8_rccomp8710_c0_seq16_8 [1924 - 1106] (REVERSE SENSE) len=2459 path=[1909:0-324 2234:325-449 6166:450-740 2359:741-1100 5518:1101-1208 5626:1209-1235 2719:1236-1881 4002:1882-2458]
c0_seq17_11_rccomp8710_c0_seq17_11 [1925 - 1149] (REVERSE SENSE) len=2400 path=[1909:0-324 5680:325-367 2234:368-492 6166:493-783 2359:784-1143 5518:1144-1251 5626:1252-1278 2719:1279-1924 3365:1925-2399]
c0_seq18_11_rccomp8710_c0_seq18_11 [1712 - 858] (REVERSE SENSE) len=2368 path=[1909:0-324 5680:325-367 2234:368-492 2359:493-852 5518:853-960 5626:961-987 2719:988-1633 3845:1634-1790 4002:1791-2367]
c0_seq19_9_rccomp8710_c0_seq19_9 [1832 - 780] (REVERSE SENSE) len=2367 path=[1909:0-324 5680:325-367 2234:368-492 6166:493-783 2359:784-1143 2719:1144-1789 4002:1790-2366]
c0_seq1_15_rccomp8710_c0_seq1_15 [1960 - 1106] (REVERSE SENSE) len=3091 path=[1909:0-324 2234:325-449 6166:450-740 2359:741-1100 5518:1101-1208 5626:1209-1235 2719:1236-1881 3845:1882-2038 4002:2039-2615 3365:2616-3090]
c0_seq20_11_rccomp8710_c0_seq20_11 [1882 - 1106] (REVERSE SENSE) len=2357 path=[1909:0-324 2234:325-449 6166:450-740 2359:741-1100 5518:1101-1208 5626:1209-1235 2719:1236-1881 3365:1882-2356]
c0_seq21_8_rccomp8710_c0_seq21_8 [1816 - 737] (REVERSE SENSE) len=2351 path=[1909:0-324 2234:325-449 6166:450-740 2359:741-1100 5626:1101-1127 2719:1128-1773 4002:1774-2350]
c0_seq22_12_rccomp8710_c0_seq22_12 [1790 - 780] (REVERSE SENSE) len=2265 path=[1909:0-324 5680:325-367 2234:368-492 6166:493-783 2359:784-1143 2719:1144-1789 3365:1790-2264]
c0_seq23_11_rccomp8710_c0_seq23_11 [1604 - 345] (REVERSE SENSE) len=2260 path=[1909:0-324 5680:325-367 2234:368-492 2359:493-852 5626:853-879 2719:880-1525 3845:1526-1682 4002:1683-2259]
c0_seq24_11_rccomp8710_c0_seq24_11 [1774 - 737] (REVERSE SENSE) len=2249 path=[1909:0-324 2234:325-449 6166:450-740 2359:741-1100 5626:1101-1127 2719:1128-1773 3365:1774-2248]
c0_seq25_12_rccomp8710_c0_seq25_12 [1747 - 737] (REVERSE SENSE) len=2222 path=[1909:0-324 2234:325-449 6166:450-740 2359:741-1100 2719:1101-1746 3365:1747-2221]
c0_seq26_9_rccomp8710_c0_seq26_9 [1676 - 858] (REVERSE SENSE) len=2211 path=[1909:0-324 5680:325-367 2234:368-492 2359:493-852 5518:853-960 5626:961-987 2719:988-1633 4002:1634-2210]
c0_seq27_12_rccomp8710_c0_seq27_12 [1634 - 858] (REVERSE SENSE) len=2109 path=[1909:0-324 5680:325-367 2234:368-492 2359:493-852 5518:853-960 5626:961-987 2719:988-1633 3365:1634-2108]
c0_seq28_9_rccomp8710_c0_seq28_9 [1568 - 345] (REVERSE SENSE) len=2103 path=[1909:0-324 5680:325-367 2234:368-492 2359:493-852 5626:853-879 2719:880-1525 4002:1526-2102]
c0_seq29_12_rccomp8710_c0_seq29_12 [1591 - 815] (REVERSE SENSE) len=2066 path=[1909:0-324 2234:325-449 2359:450-809 5518:810-917 5626:918-944 2719:945-1590 3365:1591-2065]
c0_seq2_16_rccomp8710_c0_seq2_16 [1825 - 737] (REVERSE SENSE) len=2956 path=[1909:0-324 2234:325-449 6166:450-740 2359:741-1100 2719:1101-1746 3845:1747-1903 4002:1904-2480 3365:2481-2955]
c0_seq30_12_rccomp8710_c0_seq30_12 [1526 - 345] (REVERSE SENSE) len=2001 path=[1909:0-324 5680:325-367 2234:368-492 2359:493-852 5626:853-879 2719:880-1525 3365:1526-2000]
c0_seq31_13_rccomp8710_c0_seq31_13 [1499 - 345] (REVERSE SENSE) len=1974 path=[1909:0-324 5680:325-367 2234:368-492 2359:493-852 2719:853-1498 3365:1499-1973]
c0_seq32_12_rccomp8710_c0_seq32_12 [1483 - 182] (REVERSE SENSE) len=1958 path=[1909:0-324 2234:325-449 2359:450-809 5626:810-836 2719:837-1482 3365:1483-1957]
c0_seq33_13_rccomp8710_c0_seq33_13 [1456 - 182] (REVERSE SENSE) len=1931 path=[1909:0-324 2234:325-449 2359:450-809 2719:810-1455 3365:1456-1930]
c0_seq34_5_rccomp8710_c0_seq34_5 [1817 - 780] (REVERSE SENSE) len=1817 path=[1909:0-324 5680:325-367 2234:368-492 6166:493-783 2359:784-1143 5626:1144-1170 2719:1171-1816]
c0_seq35_5_rccomp8710_c0_seq35_5 [1731 - 955] (REVERSE SENSE) len=1731 path=[6676:0-130 5680:131-173 2234:174-298 6166:299-589 2359:590-949 5518:950-1057 5626:1058-1084 2719:1085-1730]
c0_seq36_6_rccomp8710_c0_seq36_6 [1596 - 586] (REVERSE SENSE) len=1596 path=[6676:0-130 5680:131-173 2234:174-298 6166:299-589 2359:590-949 2719:950-1595]
c0_seq37_6_rccomp8710_c0_seq37_6 [1440 - 664] (REVERSE SENSE) len=1440 path=[6676:0-130 5680:131-173 2234:174-298 2359:299-658 5518:659-766 5626:767-793 2719:794-1439]
c0_seq38_6_rccomp8710_c0_seq38_6 [1332 - 151] (REVERSE SENSE) len=1332 path=[6676:0-130 5680:131-173 2234:174-298 2359:299-658 5626:659-685 2719:686-1331]
c0_seq39_7_rccomp8710_c0_seq39_7 [1305 - 151] (REVERSE SENSE) len=1305 path=[6676:0-130 5680:131-173 2234:174-298 2359:299-658 2719:659-1304]
c0_seq3_16_rccomp8710_c0_seq3_16 [1669 - 815] (REVERSE SENSE) len=2800 path=[1909:0-324 2234:325-449 2359:450-809 5518:810-917 5626:918-944 2719:945-1590 3845:1591-1747 4002:1748-2324 3365:2325-2799]
c0_seq4_14_rccomp8710_c0_seq4_14 [1789 - 737] (REVERSE SENSE) len=2799 path=[1909:0-324 2234:325-449 6166:450-740 2359:741-1100 2719:1101-1746 4002:1747-2323 3365:2324-2798]
c0_seq5_17_rccomp8710_c0_seq5_17 [1577 - 345] (REVERSE SENSE) len=2708 path=[1909:0-324 5680:325-367 2234:368-492 2359:493-852 2719:853-1498 3845:1499-1655 4002:1656-2232 3365:2233-2707]
c0_seq6_16_rccomp8710_c0_seq6_16 [1561 - 182] (REVERSE SENSE) len=2692 path=[1909:0-324 2234:325-449 2359:450-809 5626:810-836 2719:837-1482 3845:1483-1639 4002:1640-2216 3365:2217-2691]
c0_seq7_17_rccomp8710_c0_seq7_17 [1534 - 182] (REVERSE SENSE) len=2665 path=[1909:0-324 2234:325-449 2359:450-809 2719:810-1455 3845:1456-1612 4002:1613-2189 3365:2190-2664]
c0_seq8_10_rccomp8710_c0_seq8_10 [2003 - 1149] (REVERSE SENSE) len=2659 path=[1909:0-324 5680:325-367 2234:368-492 6166:493-783 2359:784-1143 5518:1144-1251 5626:1252-1278 2719:1279-1924 3845:1925-2081 4002:2082-2658]
c0_seq9_14_rccomp8710_c0_seq9_14 [1633 - 815] (REVERSE SENSE) len=2643 path=[1909:0-324 2234:325-449 2359:450-809 5518:810-917 5626:918-944 2719:945-1590 4002:1591-2167 3365:2168-2642]
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
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